Sequence Similarity Clusters for the Entities in PDB 1JK8

Entity #1 | Chains: A
MHC class II HLA-DQ8 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58706
95 % 2 7 5418
90 % 4 15 2155
70 % 13 42 725
50 % 54 142 177
40 % 54 142 191
30 % 109 296 99
Entity #2 | Chains: B
MHC class II HLA-DQ8 protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 19790
95 % 3 9 4116
90 % 6 18 1958
70 % 52 133 164
50 % 54 142 176
40 % 54 142 190
30 % 110 296 99
Entity #3 | Chains: C
insulin B peptide protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.