Sequence Similarity Clusters for the Entities in PDB 1JK4

Entity #1 | Chains: A
NEUROPHYSIN 2 protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 10221
95 % 1 5 8338 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 1 5 8282
70 % 1 9 5016
50 % 1 9 4790
40 % 1 9 4540
30 % 1 9 4173
Entity #2 | Chains: B
Lys Vasopressin protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures