Sequence Similarity Clusters for the Entities in PDB 1JK0

Entity #1 | Chains: A
ribonucleoside-diphosphate reductase small chain 1 protein, length: 419 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15197
95 % 1 2 14340 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 2 14111
70 % 1 2 13253
50 % 6 7 6281
40 % 6 7 5864
30 % 6 7 5275
Entity #2 | Chains: B
ribonucleoside-diphosphate reductase small chain 2 protein, length: 345 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 27105
95 % 1 2 22803 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 1 2 22135
70 % 1 2 20304
50 % 1 2 17592
40 % 3 5 4346
30 % 3 5 4008

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures