Sequence Similarity Clusters for the Entities in PDB 1JK0

Entity #1 | Chains: A
ribonucleoside-diphosphate reductase small chain 1 protein, length: 419 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16539
95 % 1 2 15276 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 2 14960
70 % 1 2 13990
50 % 1 2 12363
40 % 1 2 11095
30 % 7 8 2565
Entity #2 | Chains: B
ribonucleoside-diphosphate reductase small chain 2 protein, length: 345 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26317
95 % 1 2 23794 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 1 2 23028
70 % 1 2 20965
50 % 1 2 18037
40 % 3 5 4299
30 % 3 5 3881

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures