Sequence Similarity Clusters for the Entities in PDB 1JK0

Entity #1 | Chains: A
ribonucleoside-diphosphate reductase small chain 1 protein, length: 419 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 14822
95 % 1 2 14021 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 2 13804
70 % 1 2 12988
50 % 6 7 6148
40 % 6 7 5741
30 % 6 7 5158
Entity #2 | Chains: B
ribonucleoside-diphosphate reductase small chain 2 protein, length: 345 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26501
95 % 1 2 22325 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 1 2 21686
70 % 1 2 19908
50 % 1 2 17278
40 % 3 5 4267
30 % 3 5 3922

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures