Sequence Similarity Clusters for the Entities in PDB 1JK0

Entity #1 | Chains: A
ribonucleoside-diphosphate reductase small chain 1 protein, length: 419 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 14588
95 % 1 2 13819 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 2 13599
70 % 1 2 12792
50 % 6 7 6057
40 % 6 7 5658
30 % 6 7 5084
Entity #2 | Chains: B
ribonucleoside-diphosphate reductase small chain 2 protein, length: 345 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26088
95 % 1 2 21997 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 1 2 21381
70 % 1 2 19617
50 % 1 2 17040
40 % 3 5 4204
30 % 3 5 3874

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.