Sequence Similarity Clusters for the Entities in PDB 1JJW

Entity #1 | Chains: A,B,C
ATP-DEPENDENT PROTEASE HSLV protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 928
95 % 2 6 1249 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.9
PDBFlex
90 % 2 6 1282
70 % 2 16 454
50 % 2 23 336
40 % 2 23 354
30 % 2 23 361

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.