Sequence Similarity Clusters for the Entities in PDB 1JJU

Entity #1 | Chains: A
QUINOHEMOPROTEIN AMINE DEHYDROGENASE protein, length: 489 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 31056
95 % 2 2 25279 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 2 24452
70 % 2 2 22319
50 % 2 2 19344
40 % 3 4 11240
30 % 3 4 9764
Entity #2 | Chains: B
QUINOHEMOPROTEIN AMINE DEHYDROGENASE protein, length: 337 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 34187
95 % 2 2 27094 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 2 2 26189
70 % 2 2 23778
50 % 2 2 20487
40 % 2 2 18120
30 % 3 4 10099
Entity #3 | Chains: C
QUINOHEMOPROTEIN AMINE DEHYDROGENASE protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 46714
95 % 2 2 34913
90 % 2 2 33379
70 % 2 2 29765
50 % 3 4 15627
40 % 3 4 13944
30 % 3 4 11931

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.