Sequence Similarity Clusters for the Entities in PDB 1JJO

Entity #1 | Chains: A,B
NEUROSERPIN protein, length: 40 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36123
95 % 1 1 38079 Flexibility: No
,
PDBFlex
90 % 1 1 36312
70 % 1 1 32208
50 % 1 1 27387
40 % 1 1 24013
30 % 1 1 20002
Entity #2 | Chains: C,D
NEUROSERPIN protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34856
95 % 1 1 34524 Flexibility: No
,
PDBFlex
90 % 1 1 33005
70 % 1 1 29440
50 % 1 1 25141
40 % 1 1 22072
30 % 2 2 13170
Entity #3 | Chains: E,F
NEUROSERPIN protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45707
95 % 1 1 38078 Flexibility: No
,
PDBFlex
90 % 1 1 36311
70 % 1 1 32207
50 % 1 1 27386
40 % 1 1 24012
30 % 1 1 20001

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures