Sequence Similarity Clusters for the Entities in PDB 1JJO

Entity #1 | Chains: A,B
NEUROSERPIN protein, length: 40 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50753
95 % 1 1 37907 Flexibility: No
,
PDBFlex
90 % 1 1 36166
70 % 1 1 32129
50 % 1 1 27443
40 % 1 1 24252
30 % 1 1 20605
Entity #2 | Chains: C,D
NEUROSERPIN protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39430
95 % 1 1 30530 Flexibility: No
,
PDBFlex
90 % 1 1 29443
70 % 1 1 26526
50 % 1 1 22673
40 % 1 1 19966
30 % 1 1 16937
Entity #3 | Chains: E,F
NEUROSERPIN protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50916
95 % 1 1 38044
90 % 1 1 36293
70 % 1 1 32249
50 % 1 1 27554
40 % 1 1 24360
30 % 1 1 20713

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures