Sequence Similarity Clusters for the Entities in PDB 1JJO

Entity #1 | Chains: A,B
NEUROSERPIN protein, length: 40 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50116
95 % 1 1 37440 Flexibility: No
,
PDBFlex
90 % 1 1 35731
70 % 1 1 31752
50 % 1 1 27137
40 % 1 1 23976
30 % 1 1 20373
Entity #2 | Chains: C,D
NEUROSERPIN protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38908
95 % 1 1 30134 Flexibility: No
,
PDBFlex
90 % 1 1 29067
70 % 1 1 26199
50 % 1 1 22409
40 % 1 1 19737
30 % 1 1 16741
Entity #3 | Chains: E,F
NEUROSERPIN protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50279
95 % 1 1 37576
90 % 1 1 35857
70 % 1 1 31873
50 % 1 1 27249
40 % 1 1 24085
30 % 1 1 20482

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures