Sequence Similarity Clusters for the Entities in PDB 1JJK

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
OROTIDINE 5'-PHOSPHATE DECARBOXYLASE protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 2590
95 % 3 3 2904 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.3
PDBFlex
90 % 3 3 2964
70 % 3 3 2922
50 % 6 6 2237
40 % 10 10 1533
30 % 203 203 129

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures