Sequence Similarity Clusters for the Entities in PDB 1JJH

Entity #1 | Chains: A,B,C
REGULATORY PROTEIN E2 protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 23921
95 % 2 2 17560 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 2 2 17148
70 % 2 2 15908
50 % 2 2 13936
40 % 2 2 12456
30 % 2 2 10543

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures