Sequence Similarity Clusters for the Entities in PDB 1JJC

Entity #1 | Chains: A
PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 9 6875
95 % 1 9 7417
90 % 1 9 7374
70 % 1 9 7159
50 % 1 9 6603
40 % 3 15 2796
30 % 3 15 2606
Entity #2 | Chains: B
PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN protein, length: 785 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 11 5430
95 % 1 12 5118 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 1 12 5135
70 % 1 12 5078
50 % 1 12 4852
40 % 1 12 4589
30 % 5 20 2035

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.