Sequence Similarity Clusters for the Entities in PDB 1JJ9

Entity #1 | Chains: A
Matrix Metalloproteinase 8 protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 24 1770
95 % 16 25 2007 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 16 25 2056
70 % 16 25 2051
50 % 137 237 103
40 % 140 241 126
30 % 140 241 139

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures