Sequence Similarity Clusters for the Entities in PDB 1JJ9

Entity #1 | Chains: A
Matrix Metalloproteinase 8 protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 24 1481
95 % 16 25 1903 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 16 25 1946
70 % 16 25 1968
50 % 132 232 97
40 % 135 236 118
30 % 135 236 129

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.