Sequence Similarity Clusters for the Entities in PDB 1JIZ

Entity #1 | Chains: A,B
macrophage elastase MMP-12 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 10 2219
95 % 64 75 325 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.5
PDBFlex
90 % 64 75 341
70 % 64 75 376
50 % 179 232 99
40 % 183 236 122
30 % 183 236 129

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures