Sequence Similarity Clusters for the Entities in PDB 1JIW

Entity #1 | Chains: P
ALKALINE METALLOPROTEINASE protein, length: 470 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 14045
95 % 2 4 13304 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.9
PDBFlex
90 % 2 4 13091
70 % 2 4 12297
50 % 7 28 1952
40 % 7 28 1957
30 % 7 28 1890
Entity #2 | Chains: I
PROTEINASE INHIBITOR protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 45413
95 % 1 2 33997
90 % 1 2 32513
70 % 1 2 29011
50 % 1 2 24803
40 % 1 2 21848
30 % 1 3 13835

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.