Sequence Similarity Clusters for the Entities in PDB 1JIW

Entity #1 | Chains: P
ALKALINE METALLOPROTEINASE protein, length: 470 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 14516
95 % 2 4 13747 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.0
PDBFlex
90 % 2 4 13527
70 % 2 4 12721
50 % 7 28 2012
40 % 7 28 2011
30 % 7 28 1946
Entity #2 | Chains: I
PROTEINASE INHIBITOR protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 46740
95 % 1 2 34972
90 % 1 2 33420
70 % 1 2 29743
50 % 1 2 25384
40 % 1 2 22361
30 % 1 3 14182

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.