Sequence Similarity Clusters for the Entities in PDB 1JIW

Entity #1 | Chains: P
ALKALINE METALLOPROTEINASE protein, length: 470 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 15085
95 % 2 4 14235 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.0
PDBFlex
90 % 2 4 14004
70 % 2 4 13155
50 % 7 28 2101
40 % 7 28 2100
30 % 7 28 2019
Entity #2 | Chains: I
PROTEINASE INHIBITOR protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 48278
95 % 1 2 36060
90 % 1 2 34412
70 % 1 2 30577
50 % 1 2 26059
40 % 1 2 22955
30 % 1 3 14565

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures