Sequence Similarity Clusters for the Entities in PDB 1JIW

Entity #1 | Chains: P
ALKALINE METALLOPROTEINASE protein, length: 470 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 14855
95 % 2 4 14032 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.0
PDBFlex
90 % 2 4 13808
70 % 2 4 12983
50 % 7 28 2071
40 % 7 28 2072
30 % 7 28 1995
Entity #2 | Chains: I
PROTEINASE INHIBITOR protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 47719
95 % 1 2 35653
90 % 1 2 34037
70 % 1 2 30256
50 % 1 2 25797
40 % 1 2 22722
30 % 1 3 14420

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures