Sequence Similarity Clusters for the Entities in PDB 1JIQ

Entity #1 | Chains: A,B,C,D
autocrine motility factor protein, length: 558 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 5779
95 % 2 5 4409 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 14 1807
70 % 16 27 905
50 % 24 40 583
40 % 24 43 571
30 % 24 43 568

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.