Sequence Similarity Clusters for the Entities in PDB 1JIQ

Entity #1 | Chains: A,B,C,D
autocrine motility factor protein, length: 558 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 6060
95 % 2 5 4648 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 3 14 1893
70 % 16 27 951
50 % 25 42 582
40 % 25 45 572
30 % 25 45 568

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures