Sequence Similarity Clusters for the Entities in PDB 1JIM

Entity #1 | Chains: A
PORCINE PANCREATIC ELASTASE protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 77 81 398
95 % 110 117 328 Flexibility: No
Max RMSD: 1.8, Avg RMSD: 0.3
PDBFlex
90 % 110 117 346
70 % 110 117 382
50 % 114 123 429
40 % 1210 1719 4
30 % 1299 1869 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures