Sequence Similarity Clusters for the Entities in PDB 1JII

Entity #1 | Chains: A
tyrosyl-tRNA synthetase protein, length: 420 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 24867
95 % 4 4 22013 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 4 4 21338
70 % 4 4 19539
50 % 9 9 5796
40 % 9 9 5086
30 % 14 14 2816

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures