Sequence Similarity Clusters for the Entities in PDB 1JII

Entity #1 | Chains: A
tyrosyl-tRNA synthetase protein, length: 420 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 17644
95 % 4 4 16042 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 4 4 15732
70 % 4 4 14712
50 % 8 8 7339
40 % 9 9 4772
30 % 9 9 4354

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.