Sequence Similarity Clusters for the Entities in PDB 1JIA

Entity #1 | Chains: A,B
PHOSPHOLIPASE A2 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 4723
95 % 2 4 5033 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 2 4 5069
70 % 2 4 4949
50 % 84 183 153
40 % 138 309 103
30 % 138 309 116

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures