Sequence Similarity Clusters for the Entities in PDB 1JIA

Entity #1 | Chains: A,B
PHOSPHOLIPASE A2 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 14330
95 % 2 4 5094 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 2 4 5115
70 % 2 4 4988
50 % 82 181 149
40 % 136 307 100
30 % 136 307 112

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures