Sequence Similarity Clusters for the Entities in PDB 1JI4

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
NEUTROPHIL-ACTIVATING PROTEIN A protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 5377
95 % 1 1 5680 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 5698
70 % 1 1 5566
50 % 2 2 2582
40 % 3 3 2182
30 % 36 48 141

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures