Sequence Similarity Clusters for the Entities in PDB 1JI2

Entity #1 | Chains: A,B
ALPHA-AMYLASE II protein, length: 585 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 11014
95 % 4 16 1667 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 4 16 1706
70 % 4 16 1725
50 % 4 16 1766
40 % 5 23 1224
30 % 12 32 988

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.