Sequence Similarity Clusters for the Entities in PDB 1JI1

Entity #1 | Chains: A,B
ALPHA-AMYLASE I protein, length: 637 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 7984
95 % 3 11 5500 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 3 11 5531
70 % 3 11 5408
50 % 3 11 5152
40 % 3 11 4835
30 % 3 34 1023

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5Z0U 1 A Neopullulanase 1 UNP residues 30-666 2026 3.2.1.135 | Details
2 5Z0T 1 A, B Neopullulanase 1 UNP residues 30-666 2026 3.2.1.135 | Details
3 1JI1 1 A, B ALPHA-AMYLASE I 2026 3.2.1.135 | Details
4 1UH4 1 A alpha-amylase I 2026 3.2.1.135 | Details
5 2D0F 1 A alpha-amylase I 2026 3.2.1.135 | Details
6 1UH2 1 A alpha-amylase I 2026 3.2.1.135 | Details
7 2D0H 1 A alpha-amylase I 2026 3.2.1.135 | Details
8 1IZJ 1 A amylase 2026 3.2.1.135 | Details
9 1IZK 1 A amylase 2026 3.2.1.135 | Details
10 2D0G 1 A alpha-amylase I 2026 3.2.1.135 | Details
11 1UH3 1 A alpha-amylase I 2026 3.2.1.135 | Details