Sequence Similarity Clusters for the Entities in PDB 1JI1

Entity #1 | Chains: A,B
ALPHA-AMYLASE I protein, length: 637 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 8321
95 % 3 11 5730 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 3 11 5751
70 % 3 11 5620
50 % 3 11 5339
40 % 3 11 5014
30 % 3 34 1057

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5Z0U 1 A Neopullulanase 1 UNP residues 30-666 2026 3.2.1.135 | Details
2 5Z0T 1 A, B Neopullulanase 1 UNP residues 30-666 2026 3.2.1.135 | Details
3 1JI1 1 A, B ALPHA-AMYLASE I 2026 3.2.1.135 | Details
4 1UH4 1 A alpha-amylase I 2026 3.2.1.135 | Details
5 2D0F 1 A alpha-amylase I 2026 3.2.1.135 | Details
6 1UH2 1 A alpha-amylase I 2026 3.2.1.135 | Details
7 2D0H 1 A alpha-amylase I 2026 3.2.1.135 | Details
8 1IZJ 1 A amylase 2026 3.2.1.135 | Details
9 1IZK 1 A amylase 2026 3.2.1.135 | Details
10 2D0G 1 A alpha-amylase I 2026 3.2.1.135 | Details
11 1UH3 1 A alpha-amylase I 2026 3.2.1.135 | Details