Sequence Similarity Clusters for the Entities in PDB 1JI1

Entity #1 | Chains: A,B
ALPHA-AMYLASE I protein, length: 637 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 7984
95 % 3 11 5500 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 3 11 5531
70 % 3 11 5408
50 % 3 11 5152
40 % 3 11 4835
30 % 3 34 1023

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5Z0U 1 A Neopullulanase 1 UNP residues 30-666 2026 3.2.1.135 | Details
2 5Z0T 1 A, B Neopullulanase 1 UNP residues 30-666 2026 3.2.1.135 | Details
3 1JI1 1 A, B ALPHA-AMYLASE I 2026 3.2.1.135 | Details
4 1UH4 1 A alpha-amylase I 2026 3.2.1.135 | Details
5 1J0H 1 A, B neopullulanase 1422 3.2.1.135 | Details
6 2D0F 1 A alpha-amylase I 2026 3.2.1.135 | Details
7 1UH2 1 A alpha-amylase I 2026 3.2.1.135 | Details
8 2D0H 1 A alpha-amylase I 2026 3.2.1.135 | Details
9 1WZL 1 A, B Alpha-amylase II 2026 3.2.1.135 | Details
10 2D2O 1 A, B Neopullulanase 2 2026 3.2.1.135 | Details
11 1IZJ 1 A amylase 2026 3.2.1.135 | Details
12 1VB9 1 A, B alpha-amylase II 2026 3.2.1.135 | Details
13 1IZK 1 A amylase 2026 3.2.1.135 | Details
14 1JI2 1 A, B ALPHA-AMYLASE II 2026 3.2.1.135 | Details
15 1J0I 1 A, B neopullulanase 1422 3.2.1.135 | Details
16 1WZK 1 A, B Alpha-amylase II 2026 3.2.1.135 | Details
17 2D0G 1 A alpha-amylase I 2026 3.2.1.135 | Details
18 1UH3 1 A alpha-amylase I 2026 3.2.1.135 | Details
19 3A6O 1 A, B Neopullulanase 2 2026 3.2.1.135 | Details
20 1BVZ 1 A, B PROTEIN (ALPHA-AMYLASE II) N,A,B.C 2026 3.2.1.135 | Details
21 1J0J 1 A, B neopullulanase 1422 3.2.1.135 | Details
22 1VFO 1 A, B Neopullulanase 2 2026 3.2.1.135 | Details
23 1VFM 1 A, B Neopullulanase 2 2026 3.2.1.135 | Details
24 1SMA 1 A, B MALTOGENIC AMYLASE N-DOMAIN, BARREL, C-DOMAIN 75891
25 1J0K 1 A, B neopullulanase 1422 3.2.1.135 | Details
26 1G1Y 1 A, B ALPHA-AMYLASE II 2026 3.2.1.135 | Details
27 1JL8 1 A, B ALPHA-AMYLASE II 2026 3.2.1.135 | Details
28 1VFU 1 A, B Neopullulanase 2 2026 3.2.1.135 | Details
29 1GVI 1 A, B MALTOGENIC AMYLASE 275
30 1JF6 1 A, B ALPHA AMYLASE II 2026 3.2.1.135 | Details
31 1EA9 1 C, D CYCLOMALTODEXTRINASE 1409 3.2.1.54 | Details
32 1JF5 1 A, B ALPHA AMYLASE II 2026 3.2.1.135 | Details
33 1WZM 1 A, B Alpha-amylase II 2026 3.2.1.135 | Details
34 1JIB 1 A, B NEOPULLULANASE 2026 3.2.1.135 | Details