Sequence Similarity Clusters for the Entities in PDB 1JI1

Entity #1 | Chains: A,B
ALPHA-AMYLASE I protein, length: 637 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26026
95 % 3 11 5180 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 3 11 5200
70 % 3 11 5076
50 % 3 11 4843
40 % 3 11 4591
30 % 3 34 1001

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures