Sequence Similarity Clusters for the Entities in PDB 1JI1

Entity #1 | Chains: A,B
ALPHA-AMYLASE I protein, length: 637 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25193
95 % 1 9 6621 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 1 9 6598
70 % 1 9 6437
50 % 1 9 5999
40 % 1 9 5615
30 % 1 32 1016

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures