Sequence Similarity Clusters for the Entities in PDB 1JHL

Entity #1 | Chains: L
IGG1-KAPPA D11.15 FV (LIGHT CHAIN) protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65943
95 % 1 1 45412
90 % 1 1 43144
70 % 112 183 74
50 % 172 294 22
40 % 487 858 5
30 % 548 984 7
Entity #2 | Chains: H
IGG1-KAPPA D11.15 FV (HEAVY CHAIN) protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65185
95 % 1 1 44836
90 % 1 1 42599
70 % 34 82 236
50 % 292 519 8
40 % 488 858 5
30 % 549 984 7
Entity #3 | Chains: A
PHEASANT EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63966
95 % 2 2 22958
90 % 631 703 5
70 % 841 919 6
50 % 847 927 6
40 % 877 961 11
30 % 877 961 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.