Sequence Similarity Clusters for the Entities in PDB 1JHK

Entity #1 | Chains: L
Ig kappa-chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 39043
95 % 18 26 987
90 % 23 37 727
70 % 1079 1803 2
50 % 2648 4435 1
40 % 2648 4435 1
30 % 3050 5225 1
Entity #2 | Chains: H
Ig gamma-1-chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 38670
95 % 2 2 29564
90 % 2 2 28435
70 % 1281 2145 1
50 % 2649 4435 1
40 % 2649 4435 1
30 % 3051 5225 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.