Sequence Similarity Clusters for the Entities in PDB 1JHK

Entity #1 | Chains: L
Ig kappa-chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 37847
95 % 18 26 944
90 % 23 37 684
70 % 1040 1729 2
50 % 2529 4220 1
40 % 2529 4221 1
30 % 2899 4972 1
Entity #2 | Chains: H
Ig gamma-1-chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 37493
95 % 2 2 28653
90 % 2 2 27571
70 % 1223 2041 1
50 % 2530 4220 1
40 % 2530 4221 1
30 % 2900 4972 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.