Sequence Similarity Clusters for the Entities in PDB 1JH9

Entity #1 | Chains: B
5'-D(*AP*AP*CP*GP*AP*AP*AP*AP*CP*GP*TP*TP*TP*TP*CP*GP*T)-3' dna, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
PURINE NUCLEOTIDE SYNTHESIS REPRESSOR protein, length: 340 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 55887
95 % 21 22 2849 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 21 22 2895
70 % 21 22 2875
50 % 21 22 2836
40 % 21 22 2786
30 % 27 36 1028

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1QPZ 2 A PROTEIN (PURINE NUCLEOTIDE SYNTHESIS REPRESSOR) 562
2 1WET 2 A PROTEIN (PURINE REPRESSOR) 562
3 1JFT 2 A PURINE NUCLEOTIDE SYNTHESIS REPRESSOR 562
4 2PUC 2 A PROTEIN (PURINE REPRESSOR) 562
5 2PUD 2 A PROTEIN (PURINE REPRESSOR) 562
6 1QQB 2 A PURINE NUCLEOTIDE SYNTHESIS REPRESSOR 562
7 1BDH 2 A PROTEIN (PURINE REPRESSOR) 562
8 2PUB 2 A PURINE REPRESSOR 562
9 2PUG 2 A PROTEIN (PURINE REPRESSOR) 562
10 1PNR 2 A PROTEIN (PURINE REPRESSOR) 562
11 1VPW 2 A PURINE REPRESSOR 562
12 2PUE 2 A PROTEIN (PURINE REPRESSOR ) 562
13 1ZAY 2 A PROTEIN (PURINE REPRESSOR) 562
14 1JFS 2 A PURINE NUCLEOTIDE SYNTHESIS REPRESSOR 562
15 1QQA 2 A PROTEIN (PURINE NUCLEOTIDE SYNTHESIS REPRESSOR) 562
16 2PUA 2 A PURINE REPRESSOR 562
17 1QP0 2 A PROTEIN (PURINE NUCLEOTIDE SYNTHESIS REPRESSOR) 562
18 1QP7 2 A PROTEIN (PURINE NUCLEOTIDE SYNTHESIS REPRESSOR) 562
19 1QP4 2 A PROTEIN (PURINE NUCLEOTIDE SYNTHESIS REPRESSOR) 562
20 1BDI 2 A PROTEIN (PURINE REPRESSOR) 562
21 1JH9 2 A PURINE NUCLEOTIDE SYNTHESIS REPRESSOR 562
22 2PUF 2 A PROTEIN (PURINE REPRESSOR) 562