Sequence Similarity Clusters for the Entities in PDB 1JH6

Entity #1 | Chains: A,B
cyclic phosphodiesterase protein, length: 189 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 13486
95 % 1 3 12863 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.2
PDBFlex
90 % 1 3 12651
70 % 1 3 11924
50 % 1 3 10639
40 % 1 3 9599
30 % 1 3 8234

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures