Sequence Similarity Clusters for the Entities in PDB 1JH5

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J
TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 13B protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 266
95 % 5 6 369 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.3
PDBFlex
90 % 5 6 393
70 % 5 6 430
50 % 5 6 508
40 % 5 6 551
30 % 5 6 550

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.