Sequence Similarity Clusters for the Entities in PDB 1JH0

Entity #1 | Chains: L
Photosynthetic Reaction Center L subunit protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53676
95 % 92 96 332
90 % 92 96 359
70 % 92 96 397
50 % 111 125 326
40 % 111 125 347
30 % 111 125 357
Entity #2 | Chains: M
Photosynthetic Reaction Center M subunit protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 58 61 457
95 % 92 96 331
90 % 92 96 357
70 % 92 96 395
50 % 111 125 325
40 % 111 125 346
30 % 111 125 356
Entity #3 | Chains: H
Photosynthetic Reaction Center H subunit protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 91 95 239
95 % 92 96 334
90 % 92 96 360
70 % 92 96 398
50 % 92 96 464
40 % 111 125 348
30 % 111 125 358

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.