Sequence Similarity Clusters for the Entities in PDB 1JH0

Entity #1 | Chains: L
Photosynthetic Reaction Center L subunit protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53272
95 % 92 96 324
90 % 92 96 351
70 % 92 96 389
50 % 111 123 335
40 % 111 123 363
30 % 111 123 365
Entity #2 | Chains: M
Photosynthetic Reaction Center M subunit protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 58 61 445
95 % 92 96 323
90 % 92 96 349
70 % 92 96 388
50 % 111 123 334
40 % 111 123 362
30 % 111 123 364
Entity #3 | Chains: H
Photosynthetic Reaction Center H subunit protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 91 95 232
95 % 92 96 326
90 % 92 96 352
70 % 92 96 390
50 % 92 96 459
40 % 111 123 364
30 % 111 123 366

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.