Sequence Similarity Clusters for the Entities in PDB 1JGZ

Entity #1 | Chains: L
Photosynthetic Reaction Center L subunit protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 50 68 330
95 % 64 96 319
90 % 64 96 343
70 % 64 96 379
50 % 80 120 327
40 % 80 120 353
30 % 80 120 358
Entity #2 | Chains: M
Photosynthetic Reaction Center M subunit protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51366
95 % 64 96 318
90 % 64 96 341
70 % 64 96 378
50 % 80 120 326
40 % 80 120 351
30 % 80 120 357
Entity #3 | Chains: H
Photosynthetic Reaction Center H subunit protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 95 228
95 % 64 96 321
90 % 64 96 344
70 % 64 96 380
50 % 64 96 438
40 % 80 120 354
30 % 80 120 359

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.