Sequence Similarity Clusters for the Entities in PDB 1JGW

Entity #1 | Chains: L
Photosynthetic Reaction Center L subunit protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 55 68 353
95 % 69 96 323
90 % 69 96 348
70 % 69 96 388
50 % 86 120 332
40 % 86 120 361
30 % 86 120 365
Entity #2 | Chains: M
Photosynthetic Reaction Center M subunit protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51857
95 % 69 96 322
90 % 69 96 346
70 % 69 96 387
50 % 86 120 331
40 % 86 120 360
30 % 86 120 364
Entity #3 | Chains: H
Photosynthetic Reaction Center H subunit protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 69 95 232
95 % 69 96 325
90 % 69 96 349
70 % 69 96 389
50 % 69 96 449
40 % 86 120 362
30 % 86 120 366

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.