Sequence Similarity Clusters for the Entities in PDB 1JGU

Entity #1 | Chains: L
Antibody Light Chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 39327
95 % 30 145 147
90 % 33 155 149
70 % 290 2264 1
50 % 595 4587 1
40 % 595 4587 1
30 % 643 5392 1
Entity #2 | Chains: H
Antibody Heavy Chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 39540
95 % 1 2 30216
90 % 1 2 29045
70 % 290 2222 2
50 % 596 4587 1
40 % 596 4587 1
30 % 644 5392 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.