Sequence Similarity Clusters for the Entities in PDB 1JGN

Entity #1 | Chains: A
polyadenylate-binding protein 1 protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 36740
95 % 3 3 12626
90 % 3 3 12436
70 % 3 3 11723
50 % 3 3 10469
40 % 3 3 9465
30 % 3 3 8112
Entity #2 | Chains: B
polyadenylate-binding protein-interacting protein 2 protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58563
95 % 1 1 47896
90 % 1 1 43044
70 % 1 1 37920
50 % 1 1 32180
40 % 1 1 29692
30 % 1 1 24790

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures