Sequence Similarity Clusters for the Entities in PDB 1JGN

Entity #1 | Chains: A
polyadenylate-binding protein 1 protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 47489
95 % 3 3 13351
90 % 3 3 13130
70 % 3 3 12352
50 % 3 3 11015
40 % 3 3 9990
30 % 3 3 8707
Entity #2 | Chains: B
polyadenylate-binding protein-interacting protein 2 protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75377
95 % 1 1 52676
90 % 1 1 49952
70 % 1 1 43724
50 % 1 1 37335
40 % 1 1 32954
30 % 1 1 28006

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures