Sequence Similarity Clusters for the Entities in PDB 1JG3

Entity #1 | Chains: A,B
protein-L-isoaspartate O-methyltransferase protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 14754
95 % 4 4 13873 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 4 4 13641
70 % 4 4 12822
50 % 5 6 7689
40 % 6 8 4429
30 % 8 12 3033
Entity #2 | Chains: C,D
VYP(L-iso-ASP)HA protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.