Sequence Similarity Clusters for the Entities in PDB 1JFS

Entity #1 | Chains: B
5'-D(*TP*AP*CP*GP*CP*AP*AP*AP*CP*GP*TP*TP*TP*GP*CP*GP*T)-3' dna, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
PURINE NUCLEOTIDE SYNTHESIS REPRESSOR protein, length: 340 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55885
95 % 14 22 2849
90 % 14 22 2895
70 % 14 22 2875
50 % 14 22 2836
40 % 14 22 2786
30 % 20 36 1028

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures