Sequence Similarity Clusters for the Entities in PDB 1JFH

Entity #1 | Chains: A
ALPHA-AMYLASE protein, length: 496 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52244
95 % 8 17 2666 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 8 17 2717
70 % 40 78 583
50 % 42 82 598
40 % 46 91 571
30 % 46 91 567

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures