Sequence Similarity Clusters for the Entities in PDB 1JFF

Entity #1 | Chains: A
tubulin alpha chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 50 51 380
95 % 179 181 71
90 % 180 182 74
70 % 188 190 88
50 % 188 190 117
40 % 373 378 25
30 % 383 388 43
Entity #2 | Chains: B
tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 75 77 183
95 % 175 177 72
90 % 180 182 71
70 % 186 188 87
50 % 186 188 116
40 % 374 378 25
30 % 384 388 43

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures