Sequence Similarity Clusters for the Entities in PDB 1JFF

Entity #1 | Chains: A
tubulin alpha chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 55 57 379
95 % 203 205 55
90 % 204 206 60
70 % 212 214 69
50 % 212 214 97
40 % 421 426 17
30 % 431 436 31
Entity #2 | Chains: B
tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 175 176 55
95 % 199 201 57
90 % 204 206 58
70 % 210 212 68
50 % 210 212 96
40 % 422 426 17
30 % 432 436 31

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures