Sequence Similarity Clusters for the Entities in PDB 1JFF

Entity #1 | Chains: A
tubulin alpha chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 50 51 369
95 % 171 173 74
90 % 172 174 79
70 % 180 182 90
50 % 180 182 120
40 % 357 362 27
30 % 367 372 42
Entity #2 | Chains: B
tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 75 77 183
95 % 167 169 77
90 % 172 174 77
70 % 178 180 89
50 % 178 180 119
40 % 358 362 27
30 % 368 372 42

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures