Sequence Similarity Clusters for the Entities in PDB 1JFF

Entity #1 | Chains: A
tubulin alpha chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 32 33 364
95 % 99 101 127
90 % 99 101 133
70 % 101 103 151
50 % 101 103 176
40 % 200 205 75
30 % 208 213 85
Entity #2 | Chains: B
tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 46 48 205
95 % 95 97 131
90 % 98 100 134
70 % 100 102 150
50 % 100 102 175
40 % 201 205 75
30 % 209 213 85

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.