Sequence Similarity Clusters for the Entities in PDB 1JFF

Entity #1 | Chains: A
tubulin alpha chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 60 62 236
95 % 211 213 37
90 % 212 214 42
70 % 222 224 49
50 % 222 224 87
40 % 441 446 17
30 % 451 456 29
Entity #2 | Chains: B
tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 176 177 56
95 % 206 208 42
90 % 213 215 40
70 % 220 222 48
50 % 220 222 85
40 % 442 446 17
30 % 452 456 29

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures