Sequence Similarity Clusters for the Entities in PDB 1JFF

Entity #1 | Chains: A
tubulin alpha chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 41 42 377
95 % 133 135 107
90 % 133 135 111
70 % 135 137 126
50 % 135 137 156
40 % 267 272 55
30 % 275 280 65
Entity #2 | Chains: B
tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 66 177
95 % 128 130 111
90 % 131 133 112
70 % 133 135 125
50 % 133 135 155
40 % 268 272 55
30 % 276 280 65

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.