Sequence Similarity Clusters for the Entities in PDB 1JF5

Entity #1 | Chains: A,B
ALPHA AMYLASE II protein, length: 585 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30290
95 % 14 16 1630 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 14 16 1667
70 % 14 16 1684
50 % 14 16 1721
40 % 21 23 1201
30 % 30 32 975

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.