Sequence Similarity Clusters for the Entities in PDB 1JF1

Entity #1 | Chains: A
HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, A-2 ALPHA CHAIN protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 47 197 52
95 % 59 246 58
90 % 65 294 36
70 % 155 692 6
50 % 155 697 6
40 % 160 748 10
30 % 171 868 15
Entity #2 | Chains: B
beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 150 600 2
95 % 170 644 3
90 % 171 653 4
70 % 190 885 4
50 % 195 907 3
40 % 195 907 9
30 % 195 907 14
Entity #3 | Chains: C
decameric peptide ligand from the MART-1/Melan-A protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.