Sequence Similarity Clusters for the Entities in PDB 1JEW

Entity #1 | Chains: R
COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 13 1067
95 % 13 13 1449
90 % 13 13 1478
70 % 13 13 1484
50 % 13 13 1538
40 % 13 13 1554
30 % 13 13 1531
Entity #2 | Chains: 1
COXSACKIEVIRUS CAPSID, COAT PROTEIN VP1 protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26736
95 % 4 4 17440
90 % 4 4 17091
70 % 6 6 11168
50 % 14 14 4438
40 % 128 159 276
30 % 128 159 285
Entity #3 | Chains: 2
COXSACKIEVIRUS CAPSID, COAT PROTEIN VP2 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26971
95 % 4 4 17672
90 % 4 4 17316
70 % 15 15 4360
50 % 128 159 303
40 % 128 159 315
30 % 160 194 165
Entity #4 | Chains: 3
COXSACKIEVIRUS CAPSID, COAT PROTEIN VP3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 27298
95 % 4 4 18030
90 % 4 4 17658
70 % 15 15 4370
50 % 137 168 240
40 % 139 170 258
30 % 175 209 148
Entity #5 | Chains: 4
COXSACKIEVIRUS CAPSID, COAT PROTEIN VP4 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 29905
95 % 8 8 9966
90 % 12 12 6151
70 % 60 87 565
50 % 94 122 435
40 % 95 123 463
30 % 95 123 460

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.