Sequence Similarity Clusters for the Entities in PDB 1JEW

Entity #1 | Chains: R
COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 13 1046
95 % 13 13 1430
90 % 13 13 1458
70 % 13 13 1464
50 % 13 13 1519
40 % 13 13 1538
30 % 13 13 1516
Entity #2 | Chains: 1
COXSACKIEVIRUS CAPSID, COAT PROTEIN VP1 protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26393
95 % 4 4 17217
90 % 4 4 16865
70 % 6 6 11034
50 % 14 14 4382
40 % 124 155 276
30 % 124 155 284
Entity #3 | Chains: 2
COXSACKIEVIRUS CAPSID, COAT PROTEIN VP2 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26622
95 % 4 4 17446
90 % 4 4 17088
70 % 15 15 4297
50 % 126 157 298
40 % 126 157 313
30 % 158 192 165
Entity #4 | Chains: 3
COXSACKIEVIRUS CAPSID, COAT PROTEIN VP3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26944
95 % 4 4 17800
90 % 4 4 17426
70 % 15 15 4307
50 % 133 164 242
40 % 135 166 260
30 % 171 205 146
Entity #5 | Chains: 4
COXSACKIEVIRUS CAPSID, COAT PROTEIN VP4 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 29494
95 % 8 8 9823
90 % 12 12 6049
70 % 60 87 554
50 % 94 122 427
40 % 95 123 454
30 % 95 123 453

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.