Sequence Similarity Clusters for the Entities in PDB 1JEW

Entity #1 | Chains: R
COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 13 1024
95 % 13 13 1408
90 % 13 13 1434
70 % 13 13 1444
50 % 13 13 1492
40 % 13 13 1513
30 % 13 13 1493
Entity #2 | Chains: 1
COXSACKIEVIRUS CAPSID, COAT PROTEIN VP1 protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 25895
95 % 4 4 16888
90 % 4 4 16545
70 % 6 6 10810
50 % 14 14 4303
40 % 124 155 275
30 % 124 155 282
Entity #3 | Chains: 2
COXSACKIEVIRUS CAPSID, COAT PROTEIN VP2 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26123
95 % 4 4 17114
90 % 4 4 16764
70 % 15 15 4209
50 % 126 157 293
40 % 126 157 307
30 % 158 192 163
Entity #4 | Chains: 3
COXSACKIEVIRUS CAPSID, COAT PROTEIN VP3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26440
95 % 4 4 17455
90 % 4 4 17093
70 % 15 15 4219
50 % 133 164 240
40 % 135 166 256
30 % 169 203 147
Entity #5 | Chains: 4
COXSACKIEVIRUS CAPSID, COAT PROTEIN VP4 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 28968
95 % 8 8 9657
90 % 12 12 5943
70 % 60 87 539
50 % 94 122 418
40 % 95 123 445
30 % 95 123 443

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.