Sequence Similarity Clusters for the Entities in PDB 1JEU

Entity #1 | Chains: A
OLIGO-PEPTIDE BINDING PROTEIN protein, length: 517 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 32 1485
95 % 2 32 1757 Flexibility: No
Max RMSD: 3.2, Avg RMSD: 0.4
PDBFlex
90 % 2 32 1795
70 % 2 36 1128
50 % 2 36 1183
40 % 2 39 1105
30 % 2 41 1039
Entity #2 | Chains: B
PEPTIDE LYS GLU LYS protein, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures