Sequence Similarity Clusters for the Entities in PDB 1JEQ

Entity #1 | Chains: A
KU70 protein, length: 609 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 42185
95 % 2 2 35424 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 2 2 33843
70 % 2 2 30126
50 % 2 2 25679
40 % 2 2 22538
30 % 2 2 18787
Entity #2 | Chains: B
KU80 protein, length: 565 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 25738
95 % 2 3 22694 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 2 3 21973
70 % 2 3 20080
50 % 2 3 17326
40 % 2 3 15310
30 % 2 3 12818

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures