Sequence Similarity Clusters for the Entities in PDB 1JEQ

Entity #1 | Chains: A
KU70 protein, length: 609 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 31180
95 % 2 2 25603 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 2 2 24751
70 % 2 2 22513
50 % 2 2 19485
40 % 2 2 17361
30 % 2 2 14927
Entity #2 | Chains: B
KU80 protein, length: 565 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 25178
95 % 2 3 21431 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 2 3 20832
70 % 2 3 19107
50 % 2 3 16622
40 % 2 3 14851
30 % 2 3 12746

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.