Sequence Similarity Clusters for the Entities in PDB 1JEQ

Entity #1 | Chains: A
KU70 protein, length: 609 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 31636
95 % 2 2 25974 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 2 2 25099
70 % 2 2 22800
50 % 2 2 19739
40 % 2 2 17583
30 % 2 2 15121
Entity #2 | Chains: B
KU80 protein, length: 565 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 25592
95 % 2 3 21751 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 2 3 21126
70 % 2 3 19395
50 % 2 3 16859
40 % 2 3 15054
30 % 2 3 12924

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures