Sequence Similarity Clusters for the Entities in PDB 1JEQ

Entity #1 | Chains: A
KU70 protein, length: 609 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 32314
95 % 2 2 26493 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 2 2 25588
70 % 2 2 23223
50 % 2 2 20072
40 % 2 2 17871
30 % 2 2 15356
Entity #2 | Chains: B
KU80 protein, length: 565 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 26186
95 % 2 3 22221 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 2 3 21566
70 % 2 3 19782
50 % 2 3 17170
40 % 2 3 15321
30 % 2 3 13146

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures