Sequence Similarity Clusters for the Entities in PDB 1JEN

Entity #1 | Chains: B,D
PROTEIN (S-ADENOSYLMETHIONINE DECARBOXYLASE (BETA CHAIN)) protein, length: 67 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 23 1808
95 % 16 23 2366 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.5
PDBFlex
90 % 16 23 2427
70 % 16 23 2414
50 % 16 23 2405
40 % 16 23 2385
30 % 16 23 2282
Entity #2 | Chains: A,C
PROTEIN (S-ADENOSYLMETHIONINE DECARBOXYLASE (ALPHA CHAIN)) protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37743
95 % 16 23 2320 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 16 23 2382
70 % 16 23 2378
50 % 16 23 2357
40 % 16 23 2342
30 % 16 23 2243

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.