Sequence Similarity Clusters for the Entities in PDB 1JEK

Entity #1 | Chains: A
ENV POLYPROTEIN protein, length: 42 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68809
95 % 1 1 47843
90 % 1 1 45517
70 % 1 1 40116
50 % 1 1 34357
40 % 1 1 30277
30 % 1 1 25596
Entity #2 | Chains: B
ENV POLYPROTEIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69126
95 % 1 1 48118
90 % 1 1 45777
70 % 1 1 40325
50 % 1 1 34535
40 % 1 1 30447
30 % 1 1 25766

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.