Sequence Similarity Clusters for the Entities in PDB 1JEK

Entity #1 | Chains: A
ENV POLYPROTEIN protein, length: 42 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73181
95 % 1 1 50967
90 % 1 1 48392
70 % 1 1 42428
50 % 1 1 36193
40 % 1 1 31875
30 % 1 1 26970
Entity #2 | Chains: B
ENV POLYPROTEIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73511
95 % 1 1 51250
90 % 1 1 48660
70 % 1 1 42644
50 % 1 1 36377
40 % 1 1 32049
30 % 1 1 27144

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.