Sequence Similarity Clusters for the Entities in PDB 1JEK

Entity #1 | Chains: A
ENV POLYPROTEIN protein, length: 42 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74071
95 % 1 1 51566
90 % 1 1 48916
70 % 1 1 42845
50 % 1 1 36542
40 % 1 1 32173
30 % 1 1 27225
Entity #2 | Chains: B
ENV POLYPROTEIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74402
95 % 1 1 51850
90 % 1 1 49185
70 % 1 1 43062
50 % 1 1 36727
40 % 1 1 32348
30 % 1 1 27400

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures