Sequence Similarity Clusters for the Entities in PDB 1JEB

Entity #1 | Chains: A,C
HEMOGLOBIN ZETA CHAIN protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 15363
95 % 2 2 14394 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 2 2 14118
70 % 2 2 13245
50 % 468 734 5
40 % 473 739 9
30 % 888 1182 8
Entity #2 | Chains: B,D
HEMOGLOBIN BETA-SINGLE CHAIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43334
95 % 1 2 19141 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 1 4 10299
70 % 213 336 13
50 % 469 734 5
40 % 474 739 9
30 % 889 1182 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.