Sequence Similarity Clusters for the Entities in PDB 1JDY

Entity #1 | Chains: A,B
PHOSPHOGLUCOMUTASE protein, length: 561 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 6144
95 % 12 17 1925 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.8
PDBFlex
90 % 12 17 1970
70 % 12 17 1954
50 % 13 20 1533
40 % 13 20 1536
30 % 13 20 1525

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5VBI 1 A, B Phosphoglucomutase-1 9606 5.4.2.2 | Details
2 5JN5 1 A, B Phosphoglucomutase-1 Phosphoserine at residue 117 9606 5.4.2.2 | Details
3 5EPC 1 A, B Phosphoglucomutase-1 9606 5.4.2.2 | Details
4 5VG7 1 A Phosphoglucomutase-1 9606 5.4.2.2 | Details
5 5VG7 2 B Phosphoglucomutase-1 9606 5.4.2.2 | Details
6 6BJ0 1 A, B Phosphoglucomutase-1 9606 5.4.2.2 | Details
7 5VEC 1 A, B Phosphoglucomutase-1 9606 5.4.2.2 | Details
8 3PMG 1 A, B ALPHA-D-GLUCOSE-1,6-BISPHOSPHATE 9986 5.4.2.2 | Details
9 5F9C 1 A, B Phosphoglucomutase-1 9606 5.4.2.2 | Details
10 1VKL 1 A, B PHOSPHOGLUCOMUTASE 9986 5.4.2.2 | Details
11 1KFI 1 A, B phosphoglucomutase 1 5888 5.4.2.2 | Details
12 1C47 1 A, B ALPHA-D-GLUCOSE 1,6-BISPHOSPHATE PHOSPHOTRANSFERASE 9986 5.4.2.2 | Details
13 1JDY 1 A, B PHOSPHOGLUCOMUTASE 9986 5.4.2.2 | Details
14 1KFQ 1 A, B phosphoglucomutase 1 5888 5.4.2.2 | Details
15 1C4G 1 A, B PROTEIN (ALPHA-D-GLUCOSE 1-PHOSPHATE PHOSPHOGLUCOMUTASE) 9986 5.4.2.2 | Details
16 5TR2 1 A, B Phosphoglucomutase-1 9606 5.4.2.2 | Details
17 1LXT 1 A, B PHOSPHOGLUCOMUTASE (DEPHOSPHO FORM) 9986 5.4.2.2 | Details
18 5HSH 1 A, B Phosphoglucomutase-1 9606 5.4.2.2 | Details
19 5VIN 1 A, B Phosphoglucomutase-1 9606 5.4.2.2 | Details
20 4QG5 1 A, B, C, D Putative phosphoglucomutase 5664 5.4.2.2 | Details