Sequence Similarity Clusters for the Entities in PDB 1JDY

Entity #1 | Chains: A,B
PHOSPHOGLUCOMUTASE protein, length: 561 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 4722
95 % 7 11 2845 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.8
PDBFlex
90 % 7 11 2893
70 % 7 11 2867
50 % 8 13 2363
40 % 8 14 1997
30 % 8 14 1925

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5JN5 1 A, B Phosphoglucomutase-1 Phosphoserine at residue 117 9606 5.4.2.2 | Details
2 5EPC 1 A, B Phosphoglucomutase-1 9606 5.4.2.2 | Details
3 3PMG 1 A, B ALPHA-D-GLUCOSE-1,6-BISPHOSPHATE 9986 5.4.2.2 | Details
4 5F9C 1 A, B Phosphoglucomutase-1 9606 5.4.2.2 | Details
5 1VKL 1 A, B PHOSPHOGLUCOMUTASE 9986 5.4.2.2 | Details
6 1KFI 1 A, B phosphoglucomutase 1 5888 5.4.2.2 | Details
7 1C47 1 A, B ALPHA-D-GLUCOSE 1,6-BISPHOSPHATE PHOSPHOTRANSFERASE 9986 5.4.2.2 | Details
8 1JDY 1 A, B PHOSPHOGLUCOMUTASE 9986 5.4.2.2 | Details
9 1KFQ 1 A, B phosphoglucomutase 1 5888 5.4.2.2 | Details
10 1C4G 1 A, B PROTEIN (ALPHA-D-GLUCOSE 1-PHOSPHATE PHOSPHOGLUCOMUTASE) 9986 5.4.2.2 | Details
11 5TR2 1 A, B Phosphoglucomutase-1 9606 5.4.2.2 | Details
12 1LXT 1 A, B PHOSPHOGLUCOMUTASE (DEPHOSPHO FORM) 9986 5.4.2.2 | Details
13 5HSH 1 A, B Phosphoglucomutase-1 9606 5.4.2.2 | Details
14 4QG5 1 A, B, C, D Putative phosphoglucomutase 5664 5.4.2.2 | Details