Sequence Similarity Clusters for the Entities in PDB 1JDY

Entity #1 | Chains: A,B
PHOSPHOGLUCOMUTASE protein, length: 561 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 4547
95 % 7 11 2763 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.8
PDBFlex
90 % 7 11 2810
70 % 7 11 2786
50 % 8 13 2265
40 % 8 14 1931
30 % 8 14 1863

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures