Sequence Similarity Clusters for the Entities in PDB 1JDY

Entity #1 | Chains: A,B
PHOSPHOGLUCOMUTASE protein, length: 561 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 4395
95 % 7 11 2677 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 7 11 2721
70 % 7 11 2703
50 % 8 13 2211
40 % 8 14 1880
30 % 8 14 1819

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.