Sequence Similarity Clusters for the Entities in PDB 1JDY

Entity #1 | Chains: A,B
PHOSPHOGLUCOMUTASE protein, length: 561 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 6355
95 % 12 17 1976 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.8
PDBFlex
90 % 12 17 2027
70 % 12 17 2046
50 % 13 20 1596
40 % 13 20 1589
30 % 13 20 1563

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures