Sequence Similarity Clusters for the Entities in PDB 1JDY

Entity #1 | Chains: A,B
PHOSPHOGLUCOMUTASE protein, length: 561 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 4456
95 % 7 11 2704 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.8
PDBFlex
90 % 7 11 2749
70 % 7 11 2728
50 % 8 13 2226
40 % 8 14 1900
30 % 8 14 1840

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.