Sequence Similarity Clusters for the Entities in PDB 1JDX

Entity #1 | Chains: A
PROTEIN (L-ARGININE:GLYCINE AMIDINOTRANSFERASE) protein, length: 386 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 9 6981
95 % 5 11 6265 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 5 11 6257
70 % 5 11 6107
50 % 5 11 5707
40 % 6 12 4484
30 % 6 13 3664

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.