Sequence Similarity Clusters for the Entities in PDB 1JDW

Entity #1 | Chains: A
L-ARGININE\:GLYCINE AMIDINOTRANSFERASE protein, length: 423 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 6810
95 % 1 11 6113 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 1 11 6103
70 % 1 11 5953
50 % 1 11 5566
40 % 1 11 5222
30 % 1 12 4023

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.