Sequence Similarity Clusters for the Entities in PDB 1JDV

Entity #1 | Chains: A,B,C,D,E,F
5'-METHYLTHIOADENOSINE PHOSPHORYLASE protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 9 1323
95 % 6 9 1565 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.5
PDBFlex
90 % 6 9 1595
70 % 6 9 1611
50 % 6 9 1658
40 % 43 96 145
30 % 162 267 25

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures