Sequence Similarity Clusters for the Entities in PDB 1JDU

Entity #1 | Chains: A,B,C
5'-METHYLTHIOADENOSINE PHOSPHORYLASE protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 9 1122
95 % 9 9 1513 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.5
PDBFlex
90 % 9 9 1543
70 % 9 9 1542
50 % 9 9 1591
40 % 9 9 1608
30 % 185 223 29

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.