Sequence Similarity Clusters for the Entities in PDB 1JDT

Entity #1 | Chains: A,B,C
5'-METHYLTHIOADENOSINE PHOSPHORYLASE protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 1476
95 % 7 9 1718 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.5
PDBFlex
90 % 7 9 1759
70 % 7 9 1780
50 % 7 9 1803
40 % 47 97 155
30 % 185 285 27

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures