Sequence Similarity Clusters for the Entities in PDB 1JDT

Entity #1 | Chains: A,B,C
5'-METHYLTHIOADENOSINE PHOSPHORYLASE protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 1360
95 % 7 9 1605 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.5
PDBFlex
90 % 7 9 1637
70 % 7 9 1654
50 % 7 9 1693
40 % 46 96 146
30 % 170 269 26

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures