Sequence Similarity Clusters for the Entities in PDB 1JDT

Entity #1 | Chains: A,B,C
5'-METHYLTHIOADENOSINE PHOSPHORYLASE protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 1151
95 % 7 9 1548 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.5
PDBFlex
90 % 7 9 1582
70 % 7 9 1584
50 % 7 9 1630
40 % 7 9 1652
30 % 143 230 30

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures