Sequence Similarity Clusters for the Entities in PDB 1JDT

Entity #1 | Chains: A,B,C
5'-METHYLTHIOADENOSINE PHOSPHORYLASE protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 1051
95 % 7 9 1432 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.5
PDBFlex
90 % 7 9 1456
70 % 7 9 1478
50 % 7 9 1533
40 % 7 9 1557
30 % 134 219 29

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.